Bioinformatics with R Cookbook (Paperback)
暫譯: R 生物資訊食譜 (平裝本)
Paurush Praveen Sinha
- 出版商: Packt Publishing
- 出版日期: 2014-06-14
- 售價: $1,800
- 貴賓價: 9.5 折 $1,710
- 語言: 英文
- 頁數: 300
- 裝訂: Paperback
- ISBN: 1783283130
- ISBN-13: 9781783283132
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相關分類:
R 語言、生物資訊 Bioinformatics
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相關主題
商品描述
Over 90 practical recipes for computational biologists to model and handle real-life data using R
Overview
- Use the existing R-packages to handle biological data
- Represent biological data with attractive visualizations
- An easy-to-follow guide to handle real-life problems in Bioinformatics like Next Generation Sequencing and Microarray Analysis
In Detail
Bioinformatics is an interdisciplinary field that develops and improves upon the methods for storing, retrieving, organizing, and analyzing biological data. R is the primary language used for handling most of the data analysis work done in the domain of bioinformatics.
Bioinformatics with R Cookbook is a hands-on guide that provides you with a number of recipes offering you solutions to all the computational tasks related to bioinformatics in terms of packages and tested codes.
With the help of this book, you will learn how to analyze biological data using R, allowing you to infer new knowledge from your data coming from different types of experiments stretching from microarray to NGS and mass spectrometry.
What you will learn from this book
- Retrieve biological data from within an R environment without hassling web pages
- Annotate and enrich your data and convert the identifiers
- Find relevant text from PubMed on which to perform text mining
- Find phylogenetic relations between species
- Infer relations between genomic content and diseases via GWAS
- Classify patients based on biological or clinical features
- Represent biological data with attractive visualizations, useful for publications and presentations
Approach
This book is an easy-to-follow, stepwise guide to handle real life Bioinformatics problems. Each recipe comes with a detailed explanation to the solution steps. A systematic approach, coupled with lots of illustrations, tips, and tricks will help you as a reader grasp even the trickiest of concepts without difficulty.
Who this book is written for
This book is ideal for computational biologists and bioinformaticians with basic knowledge of R programming, bioinformatics and statistics. If you want to understand various critical concepts needed to develop your computational models in Bioinformatics, then this book is for you. Basic knowledge of R is expected.
商品描述(中文翻譯)
超過90個實用的配方,供計算生物學家使用R來建模和處理現實數據
概述
- 使用現有的R套件來處理生物數據
- 用吸引人的視覺化來表示生物數據
- 一個易於遵循的指南,處理生物信息學中的現實問題,如下一代測序(Next Generation Sequencing)和微陣列分析(Microarray Analysis)
詳細內容
生物信息學是一個跨學科的領域,旨在開發和改進存儲、檢索、組織和分析生物數據的方法。R是處理生物信息學領域中大多數數據分析工作的主要語言。
《使用R的生物信息學食譜》是一本實用指南,提供多個配方,為您提供與生物信息學相關的所有計算任務的解決方案,包括套件和經過測試的代碼。
藉助這本書,您將學會如何使用R分析生物數據,使您能夠從來自不同類型實驗的數據中推斷出新的知識,這些實驗包括微陣列、下一代測序和質譜分析。
您將從這本書中學到的內容
- 從R環境中檢索生物數據,而無需麻煩地訪問網頁
- 註釋和豐富您的數據並轉換標識符
- 從PubMed中找到相關文本以進行文本挖掘
- 找到物種之間的系統發育關係
- 通過全基因組關聯研究(GWAS)推斷基因組內容與疾病之間的關係
- 根據生物或臨床特徵對患者進行分類
- 用吸引人的視覺化來表示生物數據,對於出版和演示非常有用
方法
這本書是一個易於遵循的逐步指南,旨在處理現實中的生物信息學問題。每個配方都附有詳細的解決步驟說明。系統化的方法,加上大量的插圖、提示和技巧,將幫助您作為讀者輕鬆掌握即使是最棘手的概念。
本書的讀者對象
這本書非常適合具有基本R編程、生物信息學和統計知識的計算生物學家和生物信息學家。如果您想了解開發生物信息學計算模型所需的各種關鍵概念,那麼這本書就是為您準備的。預期具備基本的R知識。